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Package: trf @ 4.09.1

Synopsis

Tandem Repeats Finder: a program to analyze DNA sequences

Description

A tandem repeat in DNA is two or more adjacent, approximate copies of a pattern of nucleotides. Tandem Repeats Finder is a program to locate and display tandem repeats in DNA sequences. In order to use the program, the user submits a sequence in FASTA format. The output consists of two files: a repeat table file and an alignment file. Submitted sequences may be of arbitrary length. Repeats with pattern size in the range from 1 to 2000 bases are detected.

Home page
https://github.com/Benson-Genomics-Lab/TRF
Location
gnu/packages/bioinformatics.scm (line: 3060, column: 2)
License

Derivations

SystemTargetDerivationBuild status
x86_64-linux/gnu/store/r6apx4sbjqb2cqi1jyxj1w64q1y7d6x6-trf-4.09.1.drv
x86_64-linuxx86_64-w64-mingw32/gnu/store/xfl8133wvazjhw7vda6a95bifpz2zh24-trf-4.09.1.drv
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x86_64-linuxpowerpc64le-linux-gnu/gnu/store/27p2g6zaskgx95fla2bqxfl0ahc93hp4-trf-4.09.1.drv
x86_64-linuxmips64el-linux-gnu/gnu/store/02chamq1c38wq0rzvji3r8fdm3clcw17-trf-4.09.1.drv
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