Language

Package: r-bsgenome-dmelanogaster-ucsc-dm3-masked @ 1.3.99

Synopsis

Full masked genome sequences for Fly

Description

This package provides full masked genome sequences for Drosophila melanogaster (Fly) as provided by UCSC (dm3, April 2006) and stored in Biostrings objects. The sequences are the same as in BSgenome.Dmelanogaster.UCSC.dm3, except that each of them has the 4 following masks on top: (1) the mask of assembly gaps (AGAPS mask), (2) the mask of intra-contig ambiguities (AMB mask), (3) the mask of repeats from RepeatMasker (RM mask), and (4) the mask of repeats from Tandem Repeats Finder (TRF mask). Only the AGAPS and AMB masks are "active" by default.

Home page
https://www.bioconductor.org/packages/BSgenome.Dmelanogaster.UCSC.dm3.masked/
Location
gnu/packages/bioconductor.scm (line: 260, column: 2)
License

Lint warnings

LinterMessageLocation
formatting

Look for formatting issues in the source

line 275 is way too long (95 characters)
derivation

Report failure to compile a package to a derivation

failed to create i586-gnu derivation: #<&package-input-error package: #<package nghttp2@1.48.0 gnu/packages/web.scm:7487 7f8ed7409c60> input: ("_" "static")>
derivation

Report failure to compile a package to a derivation

failed to create i586-gnu derivation: #<&package-input-error package: #<package nghttp2@1.48.0 gnu/packages/web.scm:7487 7fa7aa068c60> input: ("_" "static")>
derivation

Report failure to compile a package to a derivation

failed to create i586-gnu derivation: #<&package-input-error package: #<package nghttp2@1.48.0 gnu/packages/web.scm:7487 7f5755cb9c60> input: ("_" "static")>
derivation

Report failure to compile a package to a derivation

failed to create i586-gnu derivation: #<&package-input-error package: #<package nghttp2@1.48.0 gnu/packages/web.scm:7487 7f119da52c60> input: ("_" "static")>