Language

Package: trf @ 4.09.1

Synopsis

Tandem Repeats Finder: a program to analyze DNA sequences

Description

A tandem repeat in DNA is two or more adjacent, approximate copies of a pattern of nucleotides. Tandem Repeats Finder is a program to locate and display tandem repeats in DNA sequences. In order to use the program, the user submits a sequence in FASTA format. The output consists of two files: a repeat table file and an alignment file. Submitted sequences may be of arbitrary length. Repeats with pattern size in the range from 1 to 2000 bases are detected.

Home page
https://github.com/Benson-Genomics-Lab/TRF
Location
gnu/packages/bioinformatics.scm (line: 3060, column: 2)
License

Derivations

SystemTargetDerivationBuild status
x86_64-linux/gnu/store/8abd5imd1fbhw0sdyhs22j23qxshvqxy-trf-4.09.1.drv
x86_64-linuxx86_64-w64-mingw32/gnu/store/c8ijd4y8ag6cbqh2qpjyrl2blny81psn-trf-4.09.1.drv
x86_64-linuxriscv64-linux-gnu/gnu/store/6sc0f88c8y2r1ayf19s3lww8bslrz968-trf-4.09.1.drv
x86_64-linuxpowerpc-linux-gnu/gnu/store/gfx5i9k8dpmkg955s01bfhs0zcrimwmn-trf-4.09.1.drv
x86_64-linuxpowerpc64le-linux-gnu/gnu/store/w8y3ds1h2scym64x4m22r68x9wzg5yq8-trf-4.09.1.drv
x86_64-linuxmips64el-linux-gnu/gnu/store/gj1kdr7ak8hm1da77bsxwci8ml5p2fxk-trf-4.09.1.drv
x86_64-linuxi686-w64-mingw32/gnu/store/7irralif01w97bwbx93vdpj7l69mcskf-trf-4.09.1.drv
x86_64-linuxi586-pc-gnu/gnu/store/76zn2ykc5y5rj706fmk3ckqsii966qjb-trf-4.09.1.drv
x86_64-linuxarm-linux-gnueabihf/gnu/store/kxvpsizv2m7687rjzi00bk3zzjd2jpxk-trf-4.09.1.drv
x86_64-linuxaarch64-linux-gnu/gnu/store/92ylzh38kw73q61603wy7wf0wnwj5iwn-trf-4.09.1.drv
riscv64-linux/gnu/store/3m0z9jc6nj7hycd901ki6rzchlz9j74j-trf-4.09.1.drv
    powerpc-linux/gnu/store/y930kphna6sqgblx28hhwn384ivwjnxy-trf-4.09.1.drv
      powerpc64le-linux/gnu/store/293gr10zkplk58qina5hm7sm8ldy291r-trf-4.09.1.drv
      mips64el-linux/gnu/store/f7ljd9228055g3nss0dzs1cn7pxsdjrn-trf-4.09.1.drv
        i686-linux/gnu/store/gdag0mjwaq56xw6im3fqdpw459krkfwx-trf-4.09.1.drv
        i586-gnu/gnu/store/y3fddg6f78xfqmxaivaaxqip16kyclh9-trf-4.09.1.drv
        armhf-linux/gnu/store/zfwsjs26kc2wn9niansjs5k255lw3rna-trf-4.09.1.drv
        aarch64-linux/gnu/store/iqzdqlz0xdxkggkaf8xhlhg48zm74bvg-trf-4.09.1.drv

        Lint warnings

        LinterMessageLocation
        description

        Validate package descriptions

        sentences in description should be followed by two spaces; possible infraction at 387
        derivation

        Report failure to compile a package to a derivation

        failed to create i586-gnu derivation: #<&package-input-error package: #<package nghttp2@1.48.0 gnu/packages/web.scm:7487 7f8ed7409c60> input: ("_" "static")>
        derivation

        Report failure to compile a package to a derivation

        failed to create i586-gnu derivation: #<&package-input-error package: #<package nghttp2@1.48.0 gnu/packages/web.scm:7487 7fa7aa068c60> input: ("_" "static")>
        derivation

        Report failure to compile a package to a derivation

        failed to create i586-gnu derivation: #<&package-input-error package: #<package nghttp2@1.48.0 gnu/packages/web.scm:7487 7f5755cb9c60> input: ("_" "static")>
        derivation

        Report failure to compile a package to a derivation

        failed to create i586-gnu derivation: #<&package-input-error package: #<package nghttp2@1.48.0 gnu/packages/web.scm:7487 7f119da52c60> input: ("_" "static")>
        derivation

        Report failure to compile a package to a derivation

        failed to create i586-gnu derivation: #<&package-input-error package: #<package nghttp2@1.48.0 gnu/packages/web.scm:7492 7fb2d2987dc0> input: ("_" "static")>
        derivation

        Report failure to compile a package to a derivation

        failed to create i586-gnu derivation: #<&package-input-error package: #<package nghttp2@1.48.0 gnu/packages/web.scm:7492 7f3e6bc77dc0> input: ("_" "static")>
        derivation

        Report failure to compile a package to a derivation

        failed to create i586-gnu derivation: #<&package-input-error package: #<package nghttp2@1.48.0 gnu/packages/web.scm:7492 7f62abeb7dc0> input: ("_" "static")>
        derivation

        Report failure to compile a package to a derivation

        failed to create i586-gnu derivation: #<&package-input-error package: #<package nghttp2@1.48.0 gnu/packages/web.scm:7492 7fa23c1dddc0> input: ("_" "static")>
        derivation

        Report failure to compile a package to a derivation

        failed to create i586-gnu derivation: #<&package-input-error package: #<package nghttp2@1.48.0 gnu/packages/web.scm:7492 7f0f10522dc0> input: ("_" "static")>